delete Eigen for update

ThirdParty/Numerical/Eigen/Array

-#ifndef EIGEN_ARRAY_MODULE_H
-#define EIGEN_ARRAY_MODULE_H
-
-// include Core first to handle Eigen2 support macros
-#include "Core"
-
-#ifndef EIGEN2_SUPPORT
-  #error The Eigen/Array header does no longer exist in Eigen3. All that functionality has moved to Eigen/Core.
-#endif
-
-#endif // EIGEN_ARRAY_MODULE_H

ThirdParty/Numerical/Eigen/CMakeLists.txt

-include(RegexUtils)
-test_escape_string_as_regex()
-
-file(GLOB Eigen_directory_files "*")
-
-escape_string_as_regex(ESCAPED_CMAKE_CURRENT_SOURCE_DIR "${CMAKE_CURRENT_SOURCE_DIR}")
-
-foreach(f ${Eigen_directory_files})
-  if(NOT f MATCHES "\\.txt" AND NOT f MATCHES "${ESCAPED_CMAKE_CURRENT_SOURCE_DIR}/[.].+" AND NOT f MATCHES "${ESCAPED_CMAKE_CURRENT_SOURCE_DIR}/src")
-    list(APPEND Eigen_directory_files_to_install ${f})
-  endif()
-endforeach(f ${Eigen_directory_files})
-
-install(FILES
-  ${Eigen_directory_files_to_install}
-  DESTINATION ${INCLUDE_INSTALL_DIR}/Eigen COMPONENT Devel
-  )
-
-add_subdirectory(src)

ThirdParty/Numerical/Eigen/Cholesky

-#ifndef EIGEN_CHOLESKY_MODULE_H
-#define EIGEN_CHOLESKY_MODULE_H
-
-#include "Core"
-
-#include "src/Core/util/DisableStupidWarnings.h"
-
-namespace Eigen {
-
-/** \defgroup Cholesky_Module Cholesky module
-  *
-  *
-  *
-  * This module provides two variants of the Cholesky decomposition for selfadjoint (hermitian) matrices.
-  * Those decompositions are accessible via the following MatrixBase methods:
-  *  - MatrixBase::llt(),
-  *  - MatrixBase::ldlt()
-  *
-  * \code
-  * #include <Eigen/Cholesky>
-  * \endcode
-  */
-
-#include "src/misc/Solve.h"
-#include "src/Cholesky/LLT.h"
-#include "src/Cholesky/LDLT.h"
-
-} // namespace Eigen
-
-#include "src/Core/util/ReenableStupidWarnings.h"
-
-#endif // EIGEN_CHOLESKY_MODULE_H
-/* vim: set filetype=cpp et sw=2 ts=2 ai: */

ThirdParty/Numerical/Eigen/Core

-// This file is part of Eigen, a lightweight C++ template library
-// for linear algebra.
-//
-// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
-// Copyright (C) 2007-2011 Benoit Jacob <jacob.benoit.1@gmail.com>
-//
-// Eigen is free software; you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public
-// License as published by the Free Software Foundation; either
-// version 3 of the License, or (at your option) any later version.
-//
-// Alternatively, you can redistribute it and/or
-// modify it under the terms of the GNU General Public License as
-// published by the Free Software Foundation; either version 2 of
-// the License, or (at your option) any later version.
-//
-// Eigen is distributed in the hope that it will be useful, but WITHOUT ANY
-// WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
-// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License or the
-// GNU General Public License for more details.
-//
-// You should have received a copy of the GNU Lesser General Public
-// License and a copy of the GNU General Public License along with
-// Eigen. If not, see <http://www.gnu.org/licenses/>.
-
-#ifndef EIGEN_CORE_H
-#define EIGEN_CORE_H
-
-// first thing Eigen does: stop the compiler from committing suicide
-#include "src/Core/util/DisableStupidWarnings.h"
-
-// then include this file where all our macros are defined. It's really important to do it first because
-// it's where we do all the alignment settings (platform detection and honoring the user's will if he
-// defined e.g. EIGEN_DONT_ALIGN) so it needs to be done before we do anything with vectorization.
-#include "src/Core/util/Macros.h"
-
-// if alignment is disabled, then disable vectorization. Note: EIGEN_ALIGN is the proper check, it takes into
-// account both the user's will (EIGEN_DONT_ALIGN) and our own platform checks
-#if !EIGEN_ALIGN
-  #ifndef EIGEN_DONT_VECTORIZE
-    #define EIGEN_DONT_VECTORIZE
-  #endif
-#endif
-
-#ifdef _MSC_VER
-  #include <malloc.h> // for _aligned_malloc -- need it regardless of whether vectorization is enabled
-  #if (_MSC_VER >= 1500) // 2008 or later
-    // Remember that usage of defined() in a #define is undefined by the standard.
-    // a user reported that in 64-bit mode, MSVC doesn't care to define _M_IX86_FP.
-    #if (defined(_M_IX86_FP) && (_M_IX86_FP >= 2)) || defined(_M_X64)
-      #define EIGEN_SSE2_ON_MSVC_2008_OR_LATER
-    #endif
-  #endif
-#else
-  // Remember that usage of defined() in a #define is undefined by the standard
-  #if (defined __SSE2__) && ( (!defined __GNUC__) || EIGEN_GNUC_AT_LEAST(4,2) )
-    #define EIGEN_SSE2_ON_NON_MSVC_BUT_NOT_OLD_GCC
-  #endif
-#endif
-
-#ifndef EIGEN_DONT_VECTORIZE
-
-  #if defined (EIGEN_SSE2_ON_NON_MSVC_BUT_NOT_OLD_GCC) || defined(EIGEN_SSE2_ON_MSVC_2008_OR_LATER)
-
-    // Defines symbols for compile-time detection of which instructions are
-    // used.
-    // EIGEN_VECTORIZE_YY is defined if and only if the instruction set YY is used
-    #define EIGEN_VECTORIZE
-    #define EIGEN_VECTORIZE_SSE
-    #define EIGEN_VECTORIZE_SSE2
-
-    // Detect sse3/ssse3/sse4:
-    // gcc and icc defines __SSE3__, ...
-    // there is no way to know about this on msvc. You can define EIGEN_VECTORIZE_SSE* if you
-    // want to force the use of those instructions with msvc.
-    #ifdef __SSE3__
-      #define EIGEN_VECTORIZE_SSE3
-    #endif
-    #ifdef __SSSE3__
-      #define EIGEN_VECTORIZE_SSSE3
-    #endif
-    #ifdef __SSE4_1__
-      #define EIGEN_VECTORIZE_SSE4_1
-    #endif
-    #ifdef __SSE4_2__
-      #define EIGEN_VECTORIZE_SSE4_2
-    #endif
-
-    // include files
-
-    // This extern "C" works around a MINGW-w64 compilation issue
-    // https://sourceforge.net/tracker/index.php?func=detail&aid=3018394&group_id=202880&atid=983354
-    // In essence, intrin.h is included by windows.h and also declares intrinsics (just as emmintrin.h etc. below do).
-    // However, intrin.h uses an extern "C" declaration, and g++ thus complains of duplicate declarations
-    // with conflicting linkage.  The linkage for intrinsics doesn't matter, but at that stage the compiler doesn't know;
-    // so, to avoid compile errors when windows.h is included after Eigen/Core, ensure intrinsics are extern "C" here too.
-    // notice that since these are C headers, the extern "C" is theoretically needed anyways.
-    extern "C" {
-      #include <emmintrin.h>
-      #include <xmmintrin.h>
-      #ifdef  EIGEN_VECTORIZE_SSE3
-      #include <pmmintrin.h>
-      #endif
-      #ifdef EIGEN_VECTORIZE_SSSE3
-      #include <tmmintrin.h>
-      #endif
-      #ifdef EIGEN_VECTORIZE_SSE4_1
-      #include <smmintrin.h>
-      #endif
-      #ifdef EIGEN_VECTORIZE_SSE4_2
-      #include <nmmintrin.h>
-      #endif
-    } // end extern "C"
-  #elif defined __ALTIVEC__
-    #define EIGEN_VECTORIZE
-    #define EIGEN_VECTORIZE_ALTIVEC
-    #include <altivec.h>
-    // We need to #undef all these ugly tokens defined in <altivec.h>
-    // => use __vector instead of vector
-    #undef bool
-    #undef vector
-    #undef pixel
-  #elif defined  __ARM_NEON__
-    #define EIGEN_VECTORIZE
-    #define EIGEN_VECTORIZE_NEON
-    #include <arm_neon.h>
-  #endif
-#endif
-
-#if (defined _OPENMP) && (!defined EIGEN_DONT_PARALLELIZE)
-  #define EIGEN_HAS_OPENMP
-#endif
-
-#ifdef EIGEN_HAS_OPENMP
-#include <omp.h>
-#endif
-
-// MSVC for windows mobile does not have the errno.h file
-#if !(defined(_MSC_VER) && defined(_WIN32_WCE))
-#define EIGEN_HAS_ERRNO
-#endif
-
-#ifdef EIGEN_HAS_ERRNO
-#include <cerrno>
-#endif
-#include <cstddef>
-#include <cstdlib>
-#include <cmath>
-#include <complex>
-#include <cassert>
-#include <functional>
-#include <iosfwd>
-#include <cstring>
-#include <string>
-#include <limits>
-#include <climits> // for CHAR_BIT
-// for min/max:
-#include <algorithm>
-
-// for outputting debug info
-#ifdef EIGEN_DEBUG_ASSIGN
-#include <iostream>
-#endif
-
-// required for __cpuid, needs to be included after cmath
-#if defined(_MSC_VER) && (defined(_M_IX86)||defined(_M_X64))
-  #include <intrin.h>
-#endif
-
-#if (defined(_CPPUNWIND) || defined(__EXCEPTIONS)) && !defined(EIGEN_NO_EXCEPTIONS)
-  #define EIGEN_EXCEPTIONS
-#endif
-
-#ifdef EIGEN_EXCEPTIONS
-  #include <new>
-#endif
-
-// defined in bits/termios.h
-#undef B0
-
-/** \brief Namespace containing all symbols from the %Eigen library. */
-namespace Eigen {
-
-inline static const char *SimdInstructionSetsInUse(void) {
-#if defined(EIGEN_VECTORIZE_SSE4_2)
-  return "SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2";
-#elif defined(EIGEN_VECTORIZE_SSE4_1)
-  return "SSE, SSE2, SSE3, SSSE3, SSE4.1";
-#elif defined(EIGEN_VECTORIZE_SSSE3)
-  return "SSE, SSE2, SSE3, SSSE3";
-#elif defined(EIGEN_VECTORIZE_SSE3)
-  return "SSE, SSE2, SSE3";
-#elif defined(EIGEN_VECTORIZE_SSE2)
-  return "SSE, SSE2";
-#elif defined(EIGEN_VECTORIZE_ALTIVEC)
-  return "AltiVec";
-#elif defined(EIGEN_VECTORIZE_NEON)
-  return "ARM NEON";
-#else
-  return "None";
-#endif
-}
-
-#define STAGE10_FULL_EIGEN2_API             10
-#define STAGE20_RESOLVE_API_CONFLICTS       20
-#define STAGE30_FULL_EIGEN3_API             30
-#define STAGE40_FULL_EIGEN3_STRICTNESS      40
-#define STAGE99_NO_EIGEN2_SUPPORT           99
-
-#if   defined EIGEN2_SUPPORT_STAGE40_FULL_EIGEN3_STRICTNESS
-  #define EIGEN2_SUPPORT
-  #define EIGEN2_SUPPORT_STAGE STAGE40_FULL_EIGEN3_STRICTNESS
-#elif defined EIGEN2_SUPPORT_STAGE30_FULL_EIGEN3_API
-  #define EIGEN2_SUPPORT
-  #define EIGEN2_SUPPORT_STAGE STAGE30_FULL_EIGEN3_API
-#elif defined EIGEN2_SUPPORT_STAGE20_RESOLVE_API_CONFLICTS
-  #define EIGEN2_SUPPORT
-  #define EIGEN2_SUPPORT_STAGE STAGE20_RESOLVE_API_CONFLICTS
-#elif defined EIGEN2_SUPPORT_STAGE10_FULL_EIGEN2_API
-  #define EIGEN2_SUPPORT
-  #define EIGEN2_SUPPORT_STAGE STAGE10_FULL_EIGEN2_API
-#elif defined EIGEN2_SUPPORT
-  // default to stage 3, that's what it's always meant
-  #define EIGEN2_SUPPORT_STAGE30_FULL_EIGEN3_API
-  #define EIGEN2_SUPPORT_STAGE STAGE30_FULL_EIGEN3_API
-#else
-  #define EIGEN2_SUPPORT_STAGE STAGE99_NO_EIGEN2_SUPPORT
-#endif
-
-#ifdef EIGEN2_SUPPORT
-#undef minor
-#endif
-
-// we use size_t frequently and we'll never remember to prepend it with std:: everytime just to
-// ensure QNX/QCC support
-using std::size_t;
-// gcc 4.6.0 wants std:: for ptrdiff_t 
-using std::ptrdiff_t;
-
-/** \defgroup Core_Module Core module
-  * This is the main module of Eigen providing dense matrix and vector support
-  * (both fixed and dynamic size) with all the features corresponding to a BLAS library
-  * and much more...
-  *
-  * \code
-  * #include <Eigen/Core>
-  * \endcode
-  */
-
-#include "src/Core/util/Constants.h"
-#include "src/Core/util/ForwardDeclarations.h"
-#include "src/Core/util/Meta.h"
-#include "src/Core/util/XprHelper.h"
-#include "src/Core/util/StaticAssert.h"
-#include "src/Core/util/Memory.h"
-
-#include "src/Core/NumTraits.h"
-#include "src/Core/MathFunctions.h"
-#include "src/Core/GenericPacketMath.h"
-
-#if defined EIGEN_VECTORIZE_SSE
-  #include "src/Core/arch/SSE/PacketMath.h"
-  #include "src/Core/arch/SSE/MathFunctions.h"
-  #include "src/Core/arch/SSE/Complex.h"
-#elif defined EIGEN_VECTORIZE_ALTIVEC
-  #include "src/Core/arch/AltiVec/PacketMath.h"
-  #include "src/Core/arch/AltiVec/Complex.h"
-#elif defined EIGEN_VECTORIZE_NEON
-  #include "src/Core/arch/NEON/PacketMath.h"
-  #include "src/Core/arch/NEON/Complex.h"
-#endif
-
-#include "src/Core/arch/Default/Settings.h"
-
-#include "src/Core/Functors.h"
-#include "src/Core/DenseCoeffsBase.h"
-#include "src/Core/DenseBase.h"
-#include "src/Core/MatrixBase.h"
-#include "src/Core/EigenBase.h"
-
-#ifndef EIGEN_PARSED_BY_DOXYGEN // work around Doxygen bug triggered by Assign.h r814874
-                                // at least confirmed with Doxygen 1.5.5 and 1.5.6
-  #include "src/Core/Assign.h"
-#endif
-
-#include "src/Core/util/BlasUtil.h"
-#include "src/Core/DenseStorage.h"
-#include "src/Core/NestByValue.h"
-#include "src/Core/ForceAlignedAccess.h"
-#include "src/Core/ReturnByValue.h"
-#include "src/Core/NoAlias.h"
-#include "src/Core/PlainObjectBase.h"
-#include "src/Core/Matrix.h"
-#include "src/Core/Array.h"
-#include "src/Core/CwiseBinaryOp.h"
-#include "src/Core/CwiseUnaryOp.h"
-#include "src/Core/CwiseNullaryOp.h"
-#include "src/Core/CwiseUnaryView.h"
-#include "src/Core/SelfCwiseBinaryOp.h"
-#include "src/Core/Dot.h"
-#include "src/Core/StableNorm.h"
-#include "src/Core/MapBase.h"
-#include "src/Core/Stride.h"
-#include "src/Core/Map.h"
-#include "src/Core/Block.h"
-#include "src/Core/VectorBlock.h"
-#include "src/Core/Transpose.h"
-#include "src/Core/DiagonalMatrix.h"
-#include "src/Core/Diagonal.h"
-#include "src/Core/DiagonalProduct.h"
-#include "src/Core/PermutationMatrix.h"
-#include "src/Core/Transpositions.h"
-#include "src/Core/Redux.h"
-#include "src/Core/Visitor.h"
-#include "src/Core/Fuzzy.h"
-#include "src/Core/IO.h"
-#include "src/Core/Swap.h"
-#include "src/Core/CommaInitializer.h"
-#include "src/Core/Flagged.h"
-#include "src/Core/ProductBase.h"
-#include "src/Core/Product.h"
-#include "src/Core/TriangularMatrix.h"
-#include "src/Core/SelfAdjointView.h"
-#include "src/Core/SolveTriangular.h"
-#include "src/Core/products/Parallelizer.h"
-#include "src/Core/products/CoeffBasedProduct.h"
-#include "src/Core/products/GeneralBlockPanelKernel.h"
-#include "src/Core/products/GeneralMatrixVector.h"
-#include "src/Core/products/GeneralMatrixMatrix.h"
-#include "src/Core/products/GeneralMatrixMatrixTriangular.h"
-#include "src/Core/products/SelfadjointMatrixVector.h"
-#include "src/Core/products/SelfadjointMatrixMatrix.h"
-#include "src/Core/products/SelfadjointProduct.h"
-#include "src/Core/products/SelfadjointRank2Update.h"
-#include "src/Core/products/TriangularMatrixVector.h"
-#include "src/Core/products/TriangularMatrixMatrix.h"
-#include "src/Core/products/TriangularSolverMatrix.h"
-#include "src/Core/products/TriangularSolverVector.h"
-#include "src/Core/BandMatrix.h"
-
-#include "src/Core/BooleanRedux.h"
-#include "src/Core/Select.h"
-#include "src/Core/VectorwiseOp.h"
-#include "src/Core/Random.h"
-#include "src/Core/Replicate.h"
-#include "src/Core/Reverse.h"
-#include "src/Core/ArrayBase.h"
-#include "src/Core/ArrayWrapper.h"
-
-} // namespace Eigen
-
-#include "src/Core/GlobalFunctions.h"
-
-#include "src/Core/util/ReenableStupidWarnings.h"
-
-#ifdef EIGEN2_SUPPORT
-#include "Eigen2Support"
-#endif
-
-#endif // EIGEN_CORE_H

ThirdParty/Numerical/Eigen/Dense

-#include "Core"
-#include "LU"
-#include "Cholesky"
-#include "QR"
-#include "SVD"
-#include "Geometry"
-#include "Eigenvalues"

ThirdParty/Numerical/Eigen/Eigen

-#include "Dense"
-//#include "Sparse"

ThirdParty/Numerical/Eigen/Eigen2Support

-// This file is part of Eigen, a lightweight C++ template library
-// for linear algebra.
-//
-// Copyright (C) 2009 Gael Guennebaud <gael.guennebaud@inria.fr>
-//
-// Eigen is free software; you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public
-// License as published by the Free Software Foundation; either
-// version 3 of the License, or (at your option) any later version.
-//
-// Alternatively, you can redistribute it and/or
-// modify it under the terms of the GNU General Public License as
-// published by the Free Software Foundation; either version 2 of
-// the License, or (at your option) any later version.
-//
-// Eigen is distributed in the hope that it will be useful, but WITHOUT ANY
-// WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
-// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License or the
-// GNU General Public License for more details.
-//
-// You should have received a copy of the GNU Lesser General Public
-// License and a copy of the GNU General Public License along with
-// Eigen. If not, see <http://www.gnu.org/licenses/>.
-
-#ifndef EIGEN2SUPPORT_H
-#define EIGEN2SUPPORT_H
-
-#if (!defined(EIGEN2_SUPPORT)) || (!defined(EIGEN_CORE_H))
-#error Eigen2 support must be enabled by defining EIGEN2_SUPPORT before including any Eigen header
-#endif
-
-#include "src/Core/util/DisableStupidWarnings.h"
-
-namespace Eigen {
-
-/** \defgroup Eigen2Support_Module Eigen2 support module
-  * This module provides a couple of deprecated functions improving the compatibility with Eigen2.
-  *
-  * To use it, define EIGEN2_SUPPORT before including any Eigen header
-  * \code
-  * #define EIGEN2_SUPPORT
-  * \endcode
-  *
-  */
-
-#include "src/Eigen2Support/Macros.h"
-#include "src/Eigen2Support/Memory.h"
-#include "src/Eigen2Support/Meta.h"
-#include "src/Eigen2Support/Lazy.h"
-#include "src/Eigen2Support/Cwise.h"
-#include "src/Eigen2Support/CwiseOperators.h"
-#include "src/Eigen2Support/TriangularSolver.h"
-#include "src/Eigen2Support/Block.h"
-#include "src/Eigen2Support/VectorBlock.h"
-#include "src/Eigen2Support/Minor.h"
-#include "src/Eigen2Support/MathFunctions.h"
-
-
-} // namespace Eigen
-
-#include "src/Core/util/ReenableStupidWarnings.h"
-
-// Eigen2 used to include iostream
-#include<iostream>
-
-#define USING_PART_OF_NAMESPACE_EIGEN \
-EIGEN_USING_MATRIX_TYPEDEFS \
-using Eigen::Matrix; \
-using Eigen::MatrixBase; \
-using Eigen::ei_random; \
-using Eigen::ei_real; \
-using Eigen::ei_imag; \
-using Eigen::ei_conj; \
-using Eigen::ei_abs; \
-using Eigen::ei_abs2; \
-using Eigen::ei_sqrt; \
-using Eigen::ei_exp; \
-using Eigen::ei_log; \
-using Eigen::ei_sin; \
-using Eigen::ei_cos;
-
-#endif // EIGEN2SUPPORT_H

ThirdParty/Numerical/Eigen/Eigenvalues

-#ifndef EIGEN_EIGENVALUES_MODULE_H
-#define EIGEN_EIGENVALUES_MODULE_H
-
-#include "Core"
-
-#include "src/Core/util/DisableStupidWarnings.h"