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Commit 1aa9e047 authored by Basile Sauvage's avatar Basile Sauvage
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voronoi centroidaux

parent e00046db
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include/Algo/Geometry/voronoiDiagrams.h
View file @ 1aa9e047
......@@ -45,8 +45,8 @@ public :
~VoronoiDiagram ();
const std::vector<Dart>& getSeeds (){return seeds;}
void setSeeds (const std::vector<Dart>&);
void setRandomSeeds (unsigned int nbseeds);
virtual void setSeeds (const std::vector<Dart>&);
virtual void setRandomSeeds (unsigned int nbseeds);
const std::vector<Dart>& getBorder (){return border;}
void setCost (const EdgeAttribute<REAL>& c);
......@@ -69,6 +69,7 @@ private :
typedef typename PFP::VEC3 VEC3;
double globalEnergy;
std::vector<VEC3> energyGrad; // gradient of the region energy at seed
VertexAttribute<REAL>& distances; // distances from the seed
VertexAttribute<Dart>& pathOrigins; // previous vertex on the shortest path from origin
......@@ -83,16 +84,25 @@ public :
VertexAttribute<REAL>& a);
~CentroidalVoronoiDiagram ();
void cumulateEnergyOnPaths();
unsigned int moveSeeds(); // returns the number of seeds that did move
unsigned int moveSeeds2(); // returns the number of seeds that did move
void setSeeds (const std::vector<Dart>&);
void setRandomSeeds (unsigned int nbseeds);
void cumulateEnergy();
void cumulateEnergyAndGradients();
unsigned int moveSeedsOneEdgeNoCheck(); // returns the number of seeds that did move
// move each seed along one edge according to the energy gradient
unsigned int moveSeedsOneEdgeCheck(); // returns the number of seeds that did move
// move each seed along one edge according to the energy gradient + check that the energy decreases
unsigned int moveSeedsToMedioid(); // returns the number of seeds that did move
// move each seed to the medioid of its region
REAL getGlobalEnergy() {return globalEnergy;}
protected :
void clear();
void collectVertexFromFront(Dart e);
REAL cumulateEnergyFromRoot(Dart e);
unsigned int moveSeed(unsigned int numSeed);
void cumulateEnergyAndGradientFromSeed(unsigned int numSeed);
Dart selectBestNeighborFromSeed(unsigned int numSeed);
// unsigned int moveSeed(unsigned int numSeed);
};
......
include/Algo/Geometry/voronoiDiagrams.hpp
View file @ 1aa9e047
......@@ -36,7 +36,6 @@ template <typename PFP>
void VoronoiDiagram<PFP>::setSeeds (const std::vector<Dart>& s)
{
seeds.clear();
// clear();
seeds = s;
}
......@@ -44,7 +43,6 @@ template <typename PFP>
void VoronoiDiagram<PFP>::setRandomSeeds (unsigned int nseeds)
{
seeds.clear();
// clear();
vmReached.unmarkAll();
srand ( time(NULL) );
......@@ -206,9 +204,23 @@ void CentroidalVoronoiDiagram<PFP>::collectVertexFromFront(Dart e){
}
template <typename PFP>
void CentroidalVoronoiDiagram<PFP>::setSeeds (const std::vector<Dart>& s)
{
VoronoiDiagram<PFP>::setSeeds (s);
energyGrad.resize(this->seeds.size());
}
template <typename PFP>
void CentroidalVoronoiDiagram<PFP>::cumulateEnergyOnPaths(){
void CentroidalVoronoiDiagram<PFP>::setRandomSeeds (unsigned int nseeds)
{
VoronoiDiagram<PFP>::setRandomSeeds (nseeds);
energyGrad.resize(this->seeds.size());
}
template <typename PFP>
void CentroidalVoronoiDiagram<PFP>::cumulateEnergy(){
globalEnergy = 0.0;
for (unsigned int i = 0; i < this->seeds.size(); i++)
{
......@@ -218,41 +230,107 @@ void CentroidalVoronoiDiagram<PFP>::cumulateEnergyOnPaths(){
}
template <typename PFP>
unsigned int CentroidalVoronoiDiagram<PFP>::moveSeeds(){
unsigned int m = 0;
void CentroidalVoronoiDiagram<PFP>::cumulateEnergyAndGradients(){
globalEnergy = 0.0;
for (unsigned int i = 0; i < this->seeds.size(); i++)
{
cumulateEnergyAndGradientFromSeed(i);
globalEnergy += distances[this->seeds[i]];
}
}
template <typename PFP>
unsigned int CentroidalVoronoiDiagram<PFP>::moveSeedsOneEdgeNoCheck(){
unsigned int m = 0;
for (unsigned int i = 0; i < this->seeds.size(); i++)
{
Dart oldSeed = this->seeds[i];
m += moveSeed(i);
globalEnergy += distances[oldSeed];
Dart newSeed = selectBestNeighborFromSeed(i);
// move the seed
if (newSeed != oldSeed)
{
this->seeds[i] = newSeed;
m++;
}
}
return m;
}
template <typename PFP>
unsigned int CentroidalVoronoiDiagram<PFP>::moveSeeds2(){
unsigned int CentroidalVoronoiDiagram<PFP>::moveSeedsOneEdgeCheck(){
// TODO : probable bug (memoire ?) car les iterations ralentissent inexplicablement
unsigned int m = 0;
globalEnergy = 0.0;
for (unsigned int i = 0; i < this->seeds.size(); i++)
{
Dart oldSeed = this->seeds[i];
int r = moveSeed(i);
Dart newSeed = this->seeds[i];
globalEnergy += distances[oldSeed];
REAL regionEnergy = distances[oldSeed];
if (r==1)
Dart newSeed = selectBestNeighborFromSeed(i);
// move the seed
if (newSeed != oldSeed)
{
REAL regionEnergy = distances[oldSeed];
this->computeDistancesWithinRegion(newSeed);
cumulateEnergyFromRoot(newSeed);
if (distances[newSeed] < regionEnergy)
m+=1;
{
this->seeds[i] = newSeed;
m++;
}
}
}
return m;
}
/*
template <typename PFP>
unsigned int CentroidalVoronoiDiagram<PFP>::moveSeedsOneEdgeCheck(){
// TODO : probable bug (memoire ?) car les iterations ralentissent inexplicablement
unsigned int m = 0;
for (unsigned int i = 0; i < this->seeds.size(); i++)
{
Dart oldSeed = this->seeds[i];
Dart newSeed = selectBestNeighborFromSeed(i);
// move the seed
if (newSeed != oldSeed)
{
REAL regionEnergy = distances[oldSeed];
this->seeds[i] = newSeed;
this->computeDistancesWithinRegion(newSeed);
cumulateEnergyAndGradientFromSeed(i);
if (distances[newSeed] < regionEnergy)
m++;
else
this->seeds[i] = oldSeed;
this->seeds[i] = newSeed;
}
}
return m;
}
*/
template <typename PFP>
unsigned int CentroidalVoronoiDiagram<PFP>::moveSeedsToMedioid(){
unsigned int m = 0;
/* for (unsigned int i = 0; i < this->seeds.size(); i++)
{
Dart oldSeed = this->seeds[i];
Dart newSeed = selectBestNeighborFromSeed(i);
unsigned int seedMoved = 0;
REAL regionEnergy = distances[oldSeed];
// move the seed
while (newSeed != oldSeed)
{
this->cumulateEnergyAndGradientFromSeed(numSeed);
cumulateEnergyFromRoot(newSeed);
if (distances[newSeed] < regionEnergy)
{
this->seeds[i] = newSeed;
m++;
}
}
} */
return m;
}
template <typename PFP>
typename PFP::REAL CentroidalVoronoiDiagram<PFP>::cumulateEnergyFromRoot(Dart e){
......@@ -271,6 +349,98 @@ typename PFP::REAL CentroidalVoronoiDiagram<PFP>::cumulateEnergyFromRoot(Dart e)
return distArea;
}
template <typename PFP>
void CentroidalVoronoiDiagram<PFP>::cumulateEnergyAndGradientFromSeed(unsigned int numSeed){
Dart e = this->seeds[numSeed];
std::vector<Dart> v;
v.reserve(8);
std::vector<float> da;
da.reserve(8);
distances[e] = 0.0;
Traversor2VVaE<typename PFP::MAP> tv (this->map, e);
for (Dart f = tv.begin(); f != tv.end(); f=tv.next())
{
if ( pathOrigins[f] == this->map.phi2(f))
{
float distArea = cumulateEnergyFromRoot(f);
da.push_back(distArea);
distances[e] += distances[f];
v.push_back(f);
}
}
// compute the gradient
// TODO : check if the computation of grad and proj is still valid for other edgeCost than geodesic distances
VEC3 grad (0.0);
const VertexAttribute<VEC3>& pos = this->map.template getAttribute<VEC3,VERTEX>("position");
for (unsigned int j = 0; j<v.size(); ++j)
{
Dart f = v[j];
VEC3 edgeV = pos[f] - pos[this->map.phi2(f)];
edgeV.normalize();
grad += da[j] * edgeV;
}
grad /= 2.0;
energyGrad[numSeed] = grad;
}
template <typename PFP>
Dart CentroidalVoronoiDiagram<PFP>::selectBestNeighborFromSeed(unsigned int numSeed)
{
Dart e = this->seeds[numSeed];
Dart newSeed = e;
const VertexAttribute<VEC3>& pos = this->map.template getAttribute<VEC3,VERTEX>("position");
// TODO : check if the computation of grad and proj is still valid for other edgeCost than geodesic distances
float maxProj = 0.0;
Traversor2VVaE<typename PFP::MAP> tv (this->map, e);
for (Dart f = tv.begin(); f != tv.end(); f=tv.next())
{
if ( pathOrigins[f] == this->map.phi2(f))
{
VEC3 edgeV = pos[f] - pos[this->map.phi2(f)];
// edgeV.normalize();
float proj = edgeV * energyGrad[numSeed];
if (proj > maxProj)
{
maxProj = proj;
newSeed = f;
}
}
}
return newSeed;
}
/*
template <typename PFP>
unsigned int CentroidalVoronoiDiagram<PFP>::moveSeed(unsigned int numSeed){
// collect energy and compute the gradient
// cumulateEnergyAndGradientFromSeed(numSeed);
// select the new seed
Dart newSeed = selectBestNeighborFromSeed(numSeed);
// move the seed
Dart oldSeed = this->seeds[numSeed];
unsigned int seedMoved = 0;
if (newSeed != oldSeed)
{
this->seeds[numSeed] = newSeed;
seedMoved = 1;
}
return seedMoved;
}
*/
/*
template <typename PFP>
unsigned int CentroidalVoronoiDiagram<PFP>::moveSeed(unsigned int numSeed){
Dart e = this->seeds[numSeed];
......@@ -296,7 +466,6 @@ unsigned int CentroidalVoronoiDiagram<PFP>::moveSeed(unsigned int numSeed){
}
}
/* second attempt */
// TODO : check if the computation of grad and proj is still valid for other edgeCost than geodesic distances
VEC3 grad (0.0);
const VertexAttribute<VEC3>& pos = this->map.template getAttribute<VEC3,VERTEX>("position");
......@@ -331,29 +500,9 @@ unsigned int CentroidalVoronoiDiagram<PFP>::moveSeed(unsigned int numSeed){
}
}
// if (numSeed==1 && seedMoved==1)
// CGoGNout << memoForTest * this->seeds.size() << CGoGNendl;
/* end second attempt */
/* first attempt by approximating the energy change
float minDE = 0.0;
for (unsigned int j = 0; j<v.size(); ++j)
{
float c = this->edgeCost[v[j]];
float de = regionArea * c * c;
de += 2 * c *( distances[e] - 2*distances[v[j]] );
if (de < minDE)
{
minDE = de;
seedMoved = 1;
this->seeds[numSeed] = v[j];
}
}
*/
return seedMoved;
}
*/
}// end namespace Geometry
}// end namespace Algo
}// end namespace CGoGN
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