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Commit fd2e0512 authored by Sylvain Thery's avatar Sylvain Thery
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rename parallelDo in run (as in QThread) 

add parallel version of ray selection
parent 9e73639a
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Showing with 286 additions and 175 deletions
Apps/Tuto/tuto_mt.cpp
View file @ fd2e0512
......@@ -171,7 +171,7 @@ public:
FunctorAttribThreaded(),m_positions(pos),m_positions2(pos2)
{}
void parallelDo(unsigned int i, unsigned int threadID)
void run(unsigned int i, unsigned int threadID)
{
m_positions2[i] = 1.1f * m_positions[i];
}
......@@ -207,7 +207,7 @@ public:
m_positions(pos),m_positions2(pos2)
{}
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
typename XXX::VEC3 Q(0,0,0);
int nb=0;
......@@ -258,7 +258,7 @@ public:
unsigned int getNb() { return m_nb;}
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
Dart dd = this->m_map.phi2(d);
typename XXX::VEC3 V = m_positions[dd] - m_positions[d];
......@@ -281,19 +281,9 @@ void MyQT::threadStorage()
functs.push_back(lef);
}
// LengthEdgeFunctor<PFP>* lef0 = new LengthEdgeFunctor<PFP>(myMap,position);
// LengthEdgeFunctor<PFP>* lef1 = new LengthEdgeFunctor<PFP>(myMap,position);
// LengthEdgeFunctor<PFP>* lef2 = new LengthEdgeFunctor<PFP>(myMap,position);
// LengthEdgeFunctor<PFP>* lef3 = new LengthEdgeFunctor<PFP>(myMap,position);
// functs.push_back(lef0);
// functs.push_back(lef1);
// functs.push_back(lef2);
// functs.push_back(lef3);
Algo::Parallel::foreach_cell<PFP::MAP,EDGE>(myMap, functs, 4);
//compute average length from each thread result and delete functors
double average = 0;
unsigned int all = 0;
......@@ -306,21 +296,11 @@ void MyQT::threadStorage()
}
average /= all;
// double average = (lef0->getLength()+lef1->getLength()+lef2->getLength()+lef3->getLength()) / (lef0->getNb()+lef1->getNb()+lef2->getNb()+lef3->getNb());
std::cout << "AVERAGE LENGTH "<< average << std::endl;
// delete lef0;
// delete lef1;
// delete lef2;
// delete lef3;
}
int main(int argc, char **argv)
{
// interface:
......
include/Algo/Geometry/centroid.hpp
View file @ fd2e0512
......@@ -124,7 +124,7 @@ public:
FunctorMapThreaded<typename PFP::MAP>(map), m_position(position), m_vol_centroid(vol_centroid)
{ }
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
m_vol_centroid[d] = volumeCentroid<PFP>(this->m_map, d, m_position,threadID) ;
}
......@@ -151,7 +151,7 @@ public:
FunctorMapThreaded<typename PFP::MAP>(map), m_position(position), m_fcentroid(fcentroid)
{ }
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
m_fcentroid[d] = faceCentroid<PFP>(this->m_map, d, m_position) ;
}
......@@ -178,7 +178,7 @@ public:
FunctorMapThreaded<typename PFP::MAP>(map), m_position(position), m_vcentroid(vcentroid)
{ }
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
m_vcentroid[d] = vertexNeighborhoodCentroid<PFP>(this->m_map, d, m_position) ;
}
......
include/Algo/Geometry/curvature.hpp
View file @ fd2e0512
......@@ -418,7 +418,7 @@ public:
m_Knormal(normal)
{ }
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
computeCurvatureVertex_NormalCycles<PFP>(map, d, radius, position, normal, edgeangle, kmax, kmin, Kmax, Kmin, Knormal,threadID) ;
}
......
include/Algo/Geometry/normal.hpp
View file @ fd2e0512
......@@ -180,7 +180,7 @@ public:
FunctorMapThreaded<typename PFP::MAP>(map), m_position(position), m_normal(normal)
{ }
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
m_normal[d] = vertexNormal<PFP>(this->m_map, d, m_position) ;
}
......@@ -204,7 +204,7 @@ public:
FunctorMapThreaded<typename PFP::MAP>(map), m_position(position), m_normal(normal)
{ }
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
m_normal[d] = faceNormal<PFP>(this->m_map, d, m_position) ;
}
......
include/Algo/Geometry/volume.hpp
View file @ fd2e0512
......@@ -138,7 +138,7 @@ public:
FunctorMapThreaded<typename PFP::MAP>(map), m_position(position), m_vol(0.0)
{ }
void parallelDo(Dart d, unsigned int threadID)
void run(Dart d, unsigned int threadID)
{
m_vol += convexPolyhedronVolume<PFP>(this->m_map, d, m_position,threadID) ;
}
......
include/Algo/Parallel/parallel_foreach.hpp
View file @ fd2e0512
......@@ -58,7 +58,7 @@ public:
while (!m_finished)
{
for (std::vector<unsigned int>::const_iterator it = m_ids.begin(); it != m_ids.end(); ++it)
m_functor->parallelDo(*it,m_id);
m_functor->run(*it,m_id);
m_sync1.wait();
m_sync2.wait();
}
......@@ -95,7 +95,7 @@ public:
while (!m_finished)
{
for (std::vector<Dart>::const_iterator it = m_darts.begin(); it != m_darts.end(); ++it)
m_functor->parallelDo(*it,m_id);
m_functor->run(*it,m_id);
m_sync1.wait();
m_sync2.wait();
}
......
include/Algo/Selection/raySelectFunctor.hpp
View file @ fd2e0512
......@@ -221,147 +221,8 @@ public:
}
};
/**
* Order relation between Darts with respect to the depth of
* their 0-embedding
*
* Used in a std::sort algorithm
*/
//template <typename PFP>
//class DartDepthOrdering
//{
// typedef typename PFP::MAP MAP;
//// typedef typename PFP::EMB EMB;
//
//
//protected:
// MAP& m_map;
// const typename PFP::VEC3& m_A;
// VertexAttribute<typename PFP::VEC3>& m_positions;
//public:
// DartDepthOrdering(MAP& map, unsigned int idPos, const typename PFP::VEC3& A):
// m_map(map), m_A(A), m_positions(idPos,map) {}
//
// bool operator()(const Dart& d, const Dart& e)
// {
// typename PFP::VEC3 P = m_positions[d]; //m_map.getVertexEmb(d)->getPosition();
// P -= m_A;
// typename PFP::REAL ld = P*P;// l^2
//
// P = m_positions[e]; //m_map.getVertexEmb(e)->getPosition();
// P -= m_A;
// typename PFP::REAL le = P*P;// l^2
//
// if (ld < le)
// return true;
// return false;
// }
//};
/**
* Order relation between Darts with respect to the distance of
* their 0-embedding to the line given in parameter in the constructor
*
* Used in a std::sort algorithm
*/
//template <typename PFP>
//class DartRayDistanceOrdering
//{
// typedef typename PFP::MAP MAP ;
//// typedef typename PFP::EMB EMB ;
//
//
//protected:
// MAP& m_map ;
// const typename PFP::VEC3& m_A ;
// const typename PFP::VEC3& m_AB ;
// float m_AB2 ;
// VertexAttribute<typename PFP::VEC3>& m_positions;
//
//public:
// DartRayDistanceOrdering(MAP& map, unsigned int idPos, const typename PFP::VEC3& A, const typename PFP::VEC3& AB) :
// m_map(map), m_A(A), m_AB(AB), m_positions(idPos,map)
// {
// m_AB2 = m_AB*m_AB ; // l^2
// }
//
// bool operator()(const Dart& d, const Dart& e)
// {
// typename PFP::VEC3 P = m_positions[d]; //m_map.getVertexEmb(d)->getPosition() ;
// float ld = Geom::squaredDistanceLine2Point(m_A, m_AB, m_AB2, P) ;
// P = m_positions[e]; //m_map.getVertexEmb(e)->getPosition() ;
// float le = Geom::squaredDistanceLine2Point(m_A, m_AB, m_AB2, P) ;
//
// if (ld < le)
// return true;
// return false;
// }
//};
/**
* Order relation between Darts with respect to the depth
* of their faces :
* f1 < f2 if f1 contains the vertex whose 0-embedding is the closest
*
* Used in a std::sort algorithm
*/
//template <typename PFP>
//class FaceDepthOrdering
//{
// typedef typename PFP::MAP MAP ;
//
//
//protected:
// MAP& m_map ;
// const typename PFP::VEC3& m_A ;
// VertexAttribute<typename PFP::VEC3>& m_positions;
// std::vector<Dart>& m_faces;
//
//public:
// FaceDepthOrdering(MAP& map, unsigned int idPos, const typename PFP::VEC3& A, std::vector<Dart>& faces) : m_map(map), m_A(A), m_positions(idPos,map), m_faces(faces) {}
//
//// bool operator()(const Dart& d, const Dart& e)
// bool operator()(Dart d, Dart e)
// {
// for (typename std::vector<Dart>::iterator it = m_faces.begin(); it != m_faces.end(); ++it)
// {
// CGoGNout << "Dart: "<< (it - m_faces.begin()) <<" = " << (*it)->getLabel()<<CGoGNendl;
// }
//
// CGoGNout << "beg sort op:"<<CGoGNendl;
// CGoGNout <<" darts "<<d->getLabel() <<" ?? "<< e->getLabel()<<CGoGNendl;
// typename PFP::VEC3 P = m_positions[d]; //m_map.getVertexEmb(d)->getPosition() ;
// P -= m_A ;
// typename PFP::REAL minDist = P*P ;
// Dart closestD = d ;
// Dart it = d ;
// do
// {
// P = m_positions[it]; //m_map.getVertexEmb(it)->getPosition() ; // compute the minimum
// P -= m_A ; // distance among the vertices
// typename PFP::REAL dist = P*P ; // of the face of d
// if(dist < minDist)
// minDist = dist ;
// it = m_map.phi1(it) ;
// } while(it != d) ;
// it = e ;
// do
// {
// P = m_positions[it]; //m_map.getVertexEmb(it)->getPosition() ; // if one vertex of the face
// P -= m_A ; // of e is closer than the previous
// typename PFP::REAL dist = P*P ; // minimum, then e < d
// if(dist < minDist) // else, d < e
// return false ;
// it = m_map.phi1(it) ;
// } while(it != e) ;
//
// CGoGNout << "end sort op"<<CGoGNendl;
//
//// return rand()&1;
//
// return true ;
// }
//} ;
template <typename PFP>
bool distndartOrdering(const std::pair<typename PFP::REAL, Dart>& e1, const std::pair<typename PFP::REAL, Dart>& e2)
......@@ -375,6 +236,148 @@ bool distnintOrdering(const std::pair<typename PFP::REAL, unsigned int>& e1, con
return (e1.first < e2.first);
}
namespace Parallel
{
template <typename PFP>
class FuncVertexInter: public FunctorMapThreaded<typename PFP::MAP>
{
typedef typename PFP::MAP MAP;
protected:
const VertexAttribute<typename PFP::VEC3>& m_positions;
const typename PFP::VEC3& m_A;
const typename PFP::VEC3& m_AB;
float m_AB2;
float m_distMax;
std::vector<std::pair<typename PFP::REAL, Dart> > m_vd;
public:
FuncVertexInter(MAP& map, const VertexAttribute<typename PFP::VEC3>& position, const typename PFP::VEC3& A, const typename PFP::VEC3& AB, typename PFP::REAL AB2, typename PFP::REAL dm2):
FunctorMapThreaded<typename PFP::MAP>(map), m_positions(position), m_A(A), m_AB(AB), m_AB2(AB2), m_distMax(dm2)
{}
void run(Dart d, unsigned int thread)
{
const typename PFP::VEC3& P = m_positions[d];
float dist = Geom::squaredDistanceLine2Point(m_A, m_AB, m_AB2, P);
if (dist < m_distMax)
{
typename PFP::REAL distA = (P-m_A).norm2();
m_vd.push_back(std::pair<typename PFP::REAL, Dart>(distA,d));
}
}
const std::vector<std::pair<typename PFP::REAL, Dart> >& getVertexDistances() { return m_vd;}
};
template <typename PFP>
class FuncEdgeInter: public FunctorMapThreaded<typename PFP::MAP>
{
typedef typename PFP::MAP MAP;
protected:
const VertexAttribute<typename PFP::VEC3>& m_positions;
const typename PFP::VEC3& m_A;
const typename PFP::VEC3& m_AB;
float m_AB2;
float m_distMax;
std::vector<std::pair<typename PFP::REAL, Dart> > m_ed;
public:
FuncEdgeInter(MAP& map, const VertexAttribute<typename PFP::VEC3>& position, const typename PFP::VEC3& A, const typename PFP::VEC3& AB, typename PFP::REAL AB2, typename PFP::REAL dm2):
FunctorMapThreaded<typename PFP::MAP>(map), m_positions(position), m_A(A), m_AB(AB), m_AB2(AB2), m_distMax(dm2)
{}
void run(Dart d, unsigned int thread)
{
// get back position of segment PQ
const typename PFP::VEC3& P = m_positions[d];
Dart dd = this->m_map.phi1(d);
const typename PFP::VEC3& Q = m_positions[dd];
// the three distance to P, Q and (PQ) not used here
float dist = Geom::squaredDistanceLine2Seg(m_A, m_AB, m_AB2, P, Q);
if (dist < m_distMax)
{
typename PFP::VEC3 M = (P+Q)/2.0;
typename PFP::REAL distA = (M-m_A).norm2();
m_ed.push_back(std::pair<typename PFP::REAL, Dart>(distA,d));
}
}
const std::vector<std::pair<typename PFP::REAL, Dart> >& getEdgeDistances() { return m_ed;}
};
template <typename PFP>
class FuncFaceInter: public FunctorMapThreaded<typename PFP::MAP>
{
typedef typename PFP::MAP MAP;
protected:
const VertexAttribute<typename PFP::VEC3>& m_positions;
const typename PFP::VEC3& m_A;
const typename PFP::VEC3& m_AB;
std::vector<std::pair<typename PFP::REAL, Dart> > m_fd;
public:
FuncFaceInter(MAP& map, const VertexAttribute<typename PFP::VEC3>& position, const typename PFP::VEC3& A, const typename PFP::VEC3& AB):
FunctorMapThreaded<typename PFP::MAP>(map), m_positions(position), m_A(A), m_AB(AB)
{}
void run(Dart d, unsigned int thread)
{
const typename PFP::VEC3& Ta = m_positions[d];
Dart dd = this->m_map.phi1(d);
Dart ddd = this->m_map.phi1(dd);
bool notfound = true;
do
{
// get back position of triangle Ta,Tb,Tc
const typename PFP::VEC3& Tb = m_positions[dd];
const typename PFP::VEC3& Tc = m_positions[ddd];
typename PFP::VEC3 I;
if (Geom::intersectionRayTriangleOpt<typename PFP::VEC3>(m_A, m_AB, Ta, Tb, Tc, I))
{
typename PFP::REAL dist = (I-m_A).norm2();
m_fd.push_back(std::pair<typename PFP::REAL, Dart>(dist,d));
notfound = false;
}
// next triangle if we are in polygon
dd = ddd;
ddd = this->m_map.phi1(dd);
} while ((ddd != d) && notfound);
}
const std::vector<std::pair<typename PFP::REAL, Dart> >& getFaceDistances() { return m_fd;}
};
}
} //namespace Selection
} //namespace Algo
......
include/Algo/Selection/raySelector.h
View file @ fd2e0512
......@@ -28,6 +28,7 @@
#include <algorithm>
#include <vector>
#include "Algo/Selection/raySelectFunctor.hpp"
#include "Algo/Parallel/parallel_foreach.h"
namespace CGoGN
{
......@@ -165,6 +166,133 @@ void verticesRaySelection(typename PFP::MAP& map, const VertexAttribute<typename
vecVertices[i] = distndart[i].second;
}
namespace Parallel
{
template<typename PFP>
void facesRaySelection(typename PFP::MAP& map, const VertexAttribute<typename PFP::VEC3>& position, const FunctorSelect& good, const typename PFP::VEC3& rayA, const typename PFP::VEC3& rayAB, std::vector<Dart>& vecFaces, unsigned int nbth=0, unsigned int current_thread=0)
{
if (nbth==0)
nbth = Algo::Parallel::optimalNbThreads();
std::vector<FunctorMapThreaded<typename PFP::MAP>*> functs;
for (unsigned int i=0; i < nbth; ++i)
functs.push_back(new Parallel::FuncFaceInter<PFP>(map,position,rayA, rayAB));
Algo::Parallel::foreach_cell<typename PFP::MAP,FACE>(map, functs, nbth, false, good, current_thread);
// compute total nb of intersection
unsigned int nbtot=0;
for (unsigned int i=0; i < nbth; ++i)
nbtot += static_cast<Parallel::FuncFaceInter<PFP>*>(functs[i])->getFaceDistances().size();
std::vector<std::pair<typename PFP::REAL, Dart> > distndart;
distndart.reserve(nbtot);
for (unsigned int i=0; i < nbth; ++i)
{
distndart.insert(distndart.end(),static_cast<Parallel::FuncFaceInter<PFP>*>(functs[i])->getFaceDistances().begin(), static_cast<Parallel::FuncFaceInter<PFP>*>(functs[i])->getFaceDistances().end() );
delete functs[i];
}
// sort the vector of pair dist/dart
std::sort(distndart.begin(), distndart.end(), distndartOrdering<PFP>);
vecFaces.clear();
vecFaces.reserve(nbtot);
// store sorted darts in returned vector
for (unsigned int i = 0; i < nbtot; ++i)
vecFaces.push_back(distndart[i].second);
}
template<typename PFP>
void edgesRaySelection(typename PFP::MAP& map, const VertexAttribute<typename PFP::VEC3>& position, const FunctorSelect& good, const typename PFP::VEC3& rayA, const typename PFP::VEC3& rayAB, std::vector<Dart>& vecEdges, float dist, unsigned int nbth=0, unsigned int current_thread=0)
{
typename PFP::REAL dist2 = dist * dist;
typename PFP::REAL AB2 = rayAB * rayAB;
if (nbth==0)
nbth = Algo::Parallel::optimalNbThreads();
std::vector<FunctorMapThreaded<typename PFP::MAP>*> functs;
for (unsigned int i=0; i < nbth; ++i)
functs.push_back(new Parallel::FuncEdgeInter<PFP>(map,position,rayA, rayAB, AB2, dist2));
Algo::Parallel::foreach_cell<typename PFP::MAP,EDGE>(map, functs, nbth, false, good, current_thread);
// compute total nb of intersection
unsigned int nbtot=0;
for (unsigned int i=0; i < nbth; ++i)
nbtot += static_cast<Parallel::FuncEdgeInter<PFP>*>(functs[i])->getEdgeDistances().size();
std::vector<std::pair<typename PFP::REAL, Dart> > distndart;
distndart.reserve(nbtot);
for (unsigned int i=0; i < nbth; ++i)
{
distndart.insert(distndart.end(),static_cast<Parallel::FuncEdgeInter<PFP>*>(functs[i])->getEdgeDistances().begin(), static_cast<Parallel::FuncEdgeInter<PFP>*>(functs[i])->getEdgeDistances().end() );
delete functs[i];
}
// sort the vector of pair dist/dart
std::sort(distndart.begin(), distndart.end(), distndartOrdering<PFP>);
// store sorted darts in returned vector
vecEdges.clear();
vecEdges.reserve(nbtot);
for (unsigned int i = 0; i < nbtot; ++i)
vecEdges.push_back(distndart[i].second);
}
template<typename PFP>
void verticesRaySelection(typename PFP::MAP& map, const VertexAttribute<typename PFP::VEC3>& position, const typename PFP::VEC3& rayA, const typename PFP::VEC3& rayAB, std::vector<Dart>& vecVertices, float dist, const FunctorSelect& good= allDarts, unsigned int nbth=0, unsigned int current_thread=0)
{
typename PFP::REAL dist2 = dist * dist;
typename PFP::REAL AB2 = rayAB * rayAB;
if (nbth==0)
nbth = Algo::Parallel::optimalNbThreads();
std::vector<FunctorMapThreaded<typename PFP::MAP>*> functs;
for (unsigned int i=0; i < nbth; ++i)
functs.push_back(new Parallel::FuncVertexInter<PFP>(map,position,rayA, rayAB, AB2, dist2));
Algo::Parallel::foreach_cell<typename PFP::MAP,VERTEX>(map, functs, nbth, false, good, current_thread);
// compute total nb of intersection
unsigned int nbtot=0;
for (unsigned int i=0; i < nbth; ++i)
nbtot += static_cast<Parallel::FuncVertexInter<PFP>*>(functs[i])->getVertexDistances().size();
std::vector<std::pair<typename PFP::REAL, Dart> > distndart;
distndart.reserve(nbtot);
for (unsigned int i=0; i < nbth; ++i)
{
distndart.insert(distndart.end(),static_cast<Parallel::FuncVertexInter<PFP>*>(functs[i])->getVertexDistances().begin(), static_cast<Parallel::FuncVertexInter<PFP>*>(functs[i])->getVertexDistances().end() );
delete functs[i];
}
// sort the vector of pair dist/dart
std::sort(distndart.begin(), distndart.end(), distndartOrdering<PFP>);
// store sorted darts in returned vector
vecVertices.clear();
vecVertices.reserve(nbtot);
for (unsigned int i = 0; i < nbtot; ++i)
vecVertices.push_back(distndart[i].second);
}
}
/**
* Function that does the selection of one vertex
* @param map the map we want to test
......
include/Topology/generic/functor.h
View file @ fd2e0512
......@@ -439,7 +439,7 @@ public:
/**
* Functor class for parallel::foreach_orbit/cell/dart
* Overload bool parallelDo
* Overload run
* Overload duplicate if necessary (no sharing of functors)
*/
template<typename MAP>
......@@ -463,13 +463,13 @@ public:
* @param d the dart on which apply functor